CDS

Accession Number TCMCG035C11175
gbkey CDS
Protein Id XP_021610428.1
Location complement(join(25299321..25299494,25299681..25299801,25300050..25300156,25300668..25300761,25300842..25301038,25301692..25301763,25301884..25301998,25302459..25302575,25302659..25302750,25302857..25303033,25303144..25303218,25303317..25303457,25303564..25303752,25304576..25304641,25304753..25304903,25305756..25305824,25306410..25306558,25306659..25306790,25306889..25307214,25307324..25307360,25308172..25308226,25308379..25308440,25308538..25308558,25309174..25309176))
Gene LOC110613546
GeneID 110613546
Organism Manihot esculenta

Protein

Length 913aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394209
db_source XM_021754736.1
Definition coatomer subunit beta'-2 isoform X1 [Manihot esculenta]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCTCAGACTTGAAATAAAGAGGAAACTTGCTCAAAGATCAGAAAGAGTAAAATCTGTGGATCTACATCCAACTGAACCATGGATTCTAGTGAGTTTGTATTCAGGGACTGTTTGTATCTGGAACTACCAGTCACAGACCATGGCGAAATCTTTTGAGGTCACAGAGTTACCAGTTAGATCAGCAAAGTTCGTTGCACGAAAGCAGTGGGTTGTTGCTGGAGCAGATGACATGTTTATCCGTGTATACAACTACAATACAATGGATAAGATTAAAGTGTTTGAGGCACATACAGACTACATTAGATGTGTGGCTGTCCATCCTACCCTTCCATATGTGCTGTCGTCATCTGATGATATGCTCATAAAGCTTTGGGATTGGGAGAAAGGTTGGGTCTGTACTCAGATATTTGAGGGACACTCTCATTATGTGATGCAAGTGACATTCAATCCAAAAGACACAAATACTTTTGCAAGTGCATCCCTTGATCGCACCATAAAGATTTGGAATCTTGGCTCACCTGACCCAAATTTTACACTGGACGCCCATCAAAAAGGAGTAAATTGTGTTGATTACTTTACTGGTGGTGATAAACCTTATCTAATCACAGGTTCTGATGATCACACTGCTAAGGTCTGGGACTATCAAACCAAAAGTTGTGTCCAAACACTAGAAGGCCACACTCACAATGTATCTGCAGTATGTTTTCATCCTGAACTGCCTATAATTATTACAGGTTCTGAGGATGGGACAGTTCGTATATGGCATTCCACAACTTACAGGCTTGAAAACACATTGAATTATGGTCTTGAAAGAGTTTGGGCTGTTGGATACATGAAAGGCTCACGCCGTATTGTGATTGGTTACGATGAAGGAACCATTATGGTCAAAATTGGTCGAGAAGAACCTGTTGCTAGTATGGATAACAGTGGGAAGATTATATGGGCCAAGCACAATGAAATTCAAACTGTGAACATTAAGAGTGTGGGAGCAGATTTTGAGGTTACTGATGGAGAAAGATTGCCTTTGGCTGTCAAGGAGTTGGGAACATGTGATCTTTATCCACAAAGTTTAAAGCACAATCCCAATGGGAGATTTGTTGTTGTCTGCGGAGATGGTGAGTACATCATATATACAGCTTTGGCCTGGAGAAACAGATCATTCGGTTCAGCATTGGAATTTGCTTGGTCATCGGATGGAGAGTATGCTGTTAGAGAAAGTACATCAAAGATAAAAATTTTCAGTAAAAATTTCCAGGAAAAGAAGAGCATTCGACCAACATTTTCTGCTGAGCGTATTTTTGGAGGGACTTTATTGGCGATGTGTGCAAATGACTTTATATGTTTTTATGATTGGTCTGAATGCAGGTTGATTAGGCGAATTGATGTTACTGTAAAAAACCTTTATTGGGCTGATAGTGGTGATTTGGTGGCAATTGCTAGTGATACATCATTCTACATTCTCAAATACAACCGCGACCTAGTTTCATCTTACTTGGATAGTGGAAGACCCGTTGATGAGCAAGGTGTTGAGGATGCCTTTGAGCTTCTCCATGAAACCAATGAACGTGTCAGAACTGGCTTATGGGTTGGGGATTGCTTTATCTATAACAACTCTTCCTGGAGACTTAATTATTGCGTTGGAGGAGAGGTAACCACAATGTATCATTTGGACCGCCCAATGTACTTGTTGGGGTATCTTGCTAATCAGAGTCGGGTGTATCTAATAGACAAGGAATTCAATGTTATGGGGTACACTCTACTACTTAGCTTAATTGAGTACAAGACTCTAGTGATGCGTGGAGACCTGGAAAGAGCCAATGAACTTTTACCTTCAATTCCTAAAGAGCAACATAACAGTGTGGCTCGTTTCTTGGAATCACGAGGTATGGTAGAGAATGCTCTTGAGGTAGCTACAGATCCTGATTACAAATTTGAGCTAGCTATACAGCTTGGCAGATTGGAGATTGCCAAGGAAATTGCCACTGAAGTTCAGAGTGAGTCAAAGTGGAAGCAGTTGGGAGAATTAGCTATGTCTACCGGAAAGTTAGAAATGGCTGAGGAATGTATGAAGCGGGCAACAGACTTGAGTGGGCTGTTGCTCTTGTATTCTTCCTTAGGAGATGCTGAAGGGATTTCAAAACTTGCATCTGTCGCAAAGGAGCAAGGAAAGAACAATGTTGCCTTCCTTTGTTTGTTTATGCTGGGCAAATTGGAAGATTGCCTCCAGCTTTTGGTGGAAAGCAATCGTATACCCGAGGCTGCTCTGATGGCACGATCCTATCTTCCAAGCAAGGTTTCAGAGATTGTAGCAATTTGGAGAAAAGATCTCAACAAGGTTAACCCAAAGGCTGCTGAATCTTTGGCTGATCCTGATGAGTATCCAAATATGTTTGATGATTGGCAAGTGGCTTTATCTGTCGAATCTAAAGTTACAGAGACGAGGGGTGTATATCCTCCTGCGGGGGAGTACATAAACCATGCTGATAAATCTCAAATGACACTTGTTGAGGCTTTCAGAAACATGCAAATAGAATCTCTTGAAAATGGTGACTATGATCATGAGGCTGCAGAACAAAATGGAGAGGAACAGATAGCAGAAGAACACAATGGAGAAGAAGGGAGCCAAGAGGAGGCTGTTGTGGTGGATGCTGATTCTACTGATGGTGCAGTACTTGTCAATGGAAATGAGGCTGAGGAAGAGTGGGGTACGAATAATGAAGGAACCCCGTCAGCCTAA
Protein:  
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSSDGEYAVRESTSKIKIFSKNFQEKKSIRPTFSAERIFGGTLLAMCANDFICFYDWSECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDLVSSYLDSGRPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANELLPSIPKEQHNSVARFLESRGMVENALEVATDPDYKFELAIQLGRLEIAKEIATEVQSESKWKQLGELAMSTGKLEMAEECMKRATDLSGLLLLYSSLGDAEGISKLASVAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPDEYPNMFDDWQVALSVESKVTETRGVYPPAGEYINHADKSQMTLVEAFRNMQIESLENGDYDHEAAEQNGEEQIAEEHNGEEGSQEEAVVVDADSTDGAVLVNGNEAEEEWGTNNEGTPSA